Bacterioplankton population dynamics in a changing ocean

Abstract: Bacterioplankton is characterized by high diversity, short generation times and rapid turnover. Despite their small size, these numerous microorganisms are a fundamental piece of aquatic ecosystems by channeling carbon to higher trophic levels through dissolved organic matter utilization. Yet, several gaps remain in our knowledge and understanding of bacterioplankton populations regarding detailed temporal dynamics, and mechanisms determining biogeographical patterns and potential responses to climate change. The aim of this thesis was to examine responses in bacterioplankton community composition and function when challenged by natural and anthropogenically-induced change in environmental conditions.High temporal resolution analysis of bacterioplankton population dynamics in the Baltic Sea indicated detailed seasonal responses. It also showed a similar but wide spectrum of niche differentiation patterns within several major bacterial groups. Analysis of geographic distributions of marine bacterial populations revealed bimodal occupancy-frequency patterns in bacterial communities, indicating that the presence of many locally rare taxa along with a few locally abundant taxa were explained by stochastic variation in colonization and extinction rates. Experimental manipulations with natural marine bacterioplankton assemblages revealed both specialist and generalist strategies in utilizing specific dissolved organic carbon compounds. When subjected to experimentally increased sea surface temperatures, lowered pH and additions of terrigenous carbon, some populations decreased in relative abundance while others were stable; concomitantly, many populations increased in relative abundance. Shifts in bacterial community composition were shown to correlate with changes in community functioning, but detection of such correlations depended largely on the detail of phylogenetic analysis and successional stage of the communities.The results in this thesis suggest that both natural and anthropogenically-induced changes in environmental conditions promote simultaneous adjustment and replacement of bacterial populations tightly linked with metabolic plasticity. These trade-offs play a significant role for understanding the relationship between bacterioplankton population dynamics and potential shifts in carbon cycling properties. We also show the importance of regional effects in shaping bacterial community composition, crucial for interpreting bacterioplankton distribution patterns. In conclusion, this thesis emphasizes the critical importance of connecting analysis of bacterioplankton population dynamics with examination of ecological mechanisms to improve our understanding of factors that regulate the distribution and activity of distinct bacterioplankton populations.