Search for dissertations about: "binning"

Showing result 1 - 5 of 11 swedish dissertations containing the word binning.

  1. 1. Exploring the diversity and evolution of giant viruses in deep sea sediments using genome-resolved metagenomics

    University dissertation from Uppsala : Uppsala universitet

    Author : Disa Bäckström; Uppsala universitet.; [2018]
    Keywords : NATURVETENSKAP; NATURAL SCIENCES; Metagenomics; binning; viruses; NCLDV; Megavirales; viral evolution.;

    Abstract : Viruses are the most abundant biological entities on this planet, which is impressive considering that they are completely dependent on their hosts for reproduction. Recently the idea of what viruses are has changed dramatically, with the discovery of giant viruses that belong to the Nucleocytoplasmic Large DNA Viruses (NCLDV), such as Mimiviridae, Marseilleviridae, and the proposed families Pandoraviruses, and Pithoviruses. READ MORE

  2. 2. Bioinformatic Methods in Metagenomics

    University dissertation from Stockholm : KTH Royal Institute of Technology

    Author : Johannes Alneberg; KTH.; KTH.; [2018]
    Keywords : NATURVETENSKAP; NATURAL SCIENCES; NATURVETENSKAP; NATURAL SCIENCES; NATURVETENSKAP; NATURAL SCIENCES; Bioinformatics; Metagenomics; Microbiome; Binning; Baltic Sea; Bioinformatik; Metagenomik; Mikrobiom; Binning; Östersjön;

    Abstract : Microbial organisms are a vital part of our global ecosystem. Yet, our knowledge of them is still lacking. Direct sequencing of microbial communities, i.e. READ MORE

  3. 3. Structure and function of microbial communities in acid sulfate soil and the terrestrial deep biosphere

    University dissertation from Växjö : Linnaeus University Press

    Author : Xiaofen Wu; Linnéuniversitetet.; [2016]
    Keywords : NATURVETENSKAP; NATURAL SCIENCES; molecular phylogeny; acid sulfate soils; metal; acidophiles; deep biosphere; oligotrophy; biofilm formation; metagenome; binning; metabolism; Mikrobiologi; Microbiology;

    Abstract : This thesis describes the use of different DNA sequencing technologies to investigate the structure and function of microbial communities in two extreme environments, boreal acid sulfate soil and the terrestrial deep biosphere.The first of the two investigated environments was soils containing un-oxidized metal sulfides that are termed ‘potential acid sulfate soil’ (PASS) materials. READ MORE

  4. 4. A Hybrid Pixel Detector ASIC with Energy Binning for Real-Time, Spectroscopic Dose Measurements

    University dissertation from Mid Sweden University

    Author : Winnie Wong; Mittuniversitetet.; [2012]
    Keywords : TEKNIK OCH TEKNOLOGIER; ENGINEERING AND TECHNOLOGY; Hybrid pixel detector; low power readout chip; photon counting; time over threshold ToT ; energy binning; active personal dosimeter APD ;

    Abstract : Hybrid pixel detectors have been demonstrated to provide excellent quality detection of ionising photon radiation, particularly in X-ray imaging. Recently, there has been interest in developing a hybrid pixel detector specifically for photon dosimetry. READ MORE

  5. 5. Exploration of microbial diversity and evolution through cultivation independent phylogenomics

    University dissertation from Uppsala : Acta Universitatis Upsaliensis

    Author : Joran Martijn; Uppsala universitet.; Uppsala universitet.; [2017]
    Keywords : NATURVETENSKAP; NATURAL SCIENCES; cultivation independent genomics; metagenomics; single-cell genomics; metagenomic binning; phylogenetics; phylogenomics; phylogenetic artefacts; comparative genomics; gene tree-species tree reconciliation; rRNA amplicon sequencing; Tara Oceans; origin of mitochondria; Alphaproteobacteria; Rickettsiales; Haloarchaea; endosymbiosis; Biologi med inriktning mot molekylär evolution; Biology with specialization in Molecular Evolution;

    Abstract : Our understanding of microbial evolution is largely dependent on available genomic data of diverse organisms. Yet, genome-sequencing efforts have mostly ignored the diverse uncultivable majority in favor of cultivable and sociologically relevant organisms. READ MORE